PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31800
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 205aa    MW: 22199.8 Da    PI: 5.1046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31800genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-184493255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  PEQU_31800 44 LYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFSTPEMAARAHDVAALSIKG 93
                69****998.**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.5E-124393IPR001471AP2/ERF domain
CDDcd000183.71E-3143103No hitNo description
SuperFamilySSF541711.37E-2144102IPR016177DNA-binding domain
SMARTSM003806.9E-3844107IPR001471AP2/ERF domain
PROSITE profilePS5103223.1344101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.4E-3244102IPR001471AP2/ERF domain
PRINTSPR003671.6E-104556IPR001471AP2/ERF domain
PRINTSPR003671.6E-106783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MADRYSEQES SGSNSSSPHS SSSPSDFAAG CGGKRSREGS KHPLYRGVRM RNWGKWVSEI  60
REPRKKSRIW LGTFSTPEMA ARAHDVAALS IKGSSAILNF PELAASLPKP ATLSPRDVQA  120
AAAKAAALEP AALVVAETPS TEELGDIVEL PRLGGSLLDT SGREVVYDEV VDSWPYSWAE  180
KTEDFALFSC SISPISNFDA LFWDY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A1e-1640101163ATERF1
2gcc_A1e-1640101163ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915419.13e-70PREDICTED: dehydration-responsive element-binding protein 3-like
SwissprotQ9LYD31e-60DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLM0RI331e-64M0RI33_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P14070_0013e-64(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-54ERF family protein